Tag Archives: Passage

It’s passage time again + bonus clones

We’ve continued with our standard schedule which takes us to our regular Thursday passage time. I am happy to report that my plates are looking much better than documented previously:

SK iPSC 19/05/22
Light microscope image of iPSC colony on 19/05/22
SK iPSC 19/05/22
Light microscope image of iPSC colony on 19/05/22
SK iPSC 19/05/22
Microscope image of iPSC colonies ready for passage on 19/05/22

Since I have nice separated colonies, Ash suggested that I select single colonies from two plates to establish two clones (1.1 and 1.2) in separate dishes along with a third mixed (3 x colony) plate. This feels like another milestone.

Even my gridding technique has improved 🙂

SK iPSC 19/05/22
iPSC colony gridded as part of passage protocol on 19/05/22
SK iPSC 19/05/22
Gridded cell sections lifted for transfer to new Petri dish on 19/05/22

Passage number two

We are now into a bit of rhythm with my little iPSC cell babies. We cleaned the cells on Wednesday (11th) and they are ready for the second passage.

Ash’s plate looks great with lots of lovely iPSC colonies:

Ash iPSC 12/05/22
Ash’s plate of my iPSC cells 12/05/22 at 1X magnification.

My plates are less delightful – you can see some ‘schmucky’ areas marked by broken edges and random growth.

SK iPSC 12/05/22
Svenja’s ‘good’ iPSC plate 12/05/22
SK iPSC 12/05/22
Svenja’s ‘bad’ iPSC plate 12/05/22

Regardless, there are a few really good colonies to select for the next passage.

At this point, we are continuing to use the slightly more time-intensive dispase method as it enables me to choose the best colonies for continued growth.

SK iPSC 12/05/22 - grid

SK iPSC 12/05/22 - grid
Gridding up good colonies for passage 0n 12/05/22

As you can see my needle technique is improving, but the size is still a little small at times and not quite uniform.

As part of my project documentation, I’ve also fixed the parent plates this passage using 4% PFA. While the fixed cells are not hazardous, we will also coat the cell base with resin so that the vessels can be displayed as part of artwork components if needed.


My turn passaging cells

It was my turn passaging cells today using the dispase method demonstrated by Ash yesterday.  To gain a bit more experience, I passaged both dishes (Dish #1 and parent plate Dish #2). While the process went well overall, I definitely still need a bit of practice with my needle technique.

Gridding cell colonies with needle
Slightly ‘scratchy’ gridding of cell colonies with the needle on 05/05/22 viewed at .63 X magnification.


First Passage

Today, we need to passage the first, more established plate – Dish #2. The first passage is always a little risky as it takes skill to ensure attachment of the passaged cells will occur. It is also a little more complex, as we have a lower number of colonies due to low number of initial PBMCs (due to my early media wash error).

As such Ash has kindly offered to do the first passage  to ensure viable colonies moving forward. I will passage Dish #1 tomorrow as the colonies need a little more time to grow.

We are using the dispase method to passage the cells as this will enable a careful selection of iPSC-like cells only. This involves incubating the cells with the  dispase protease to gently dissociate the cells from the coated dish surface.  Once the cells are less attached, good iPSC-like cell areas are selected and gridded up into uniformly sized sections using a needle (around 200 – 500 microns in size = 500 – 1000 cells).

Colony with cleaned centre
Colony with cleaned centre ready for selection and passage viewed at 1 X magnification. 
Colony gridded with needle
iPSC-like colony gridded with needle during passage on 04/05/22.
iPSC-like colony gridded with needle during passage on 04/05/22.
Another iPSC-like colony gridded with needle during passage on 04/05/22.

Once colonies are gridded into sections, they are gently removed with a spatula. The aim is to maintain the cells in sections so that they will be more likely to attach and grow new colonies.

Gently lifting cells with spatula
Gently lifting cell sections with spatula.
Gently lifting cell sections with spatula.
Gently lifting cell sections with spatula.

Once the desired areas have been lifted with the spatula, the cell clusters are swirled together and collected with a pipette for transfer into a new Petri dish.

Lifted cell clusters
Lifted cell clusters ready for transfer to new Petri dish.
Pipette collection of cell clusters
Pipette collection of cell clusters.

Once transferred, the cell sections are dispersed throughout the plate to avoid clustering of colonies. At this stage, we will hold on to the parent plate until we are sure that the cell sections have attached.

iPSC Maintenance

As part of my reprogramming training, I have now learnt how to maintain iPSC colonies. Maintaining iPSCs is a bit different to standard cell culture, as it involves cleaning the plates (i.e. removing unwanted differentiated cells) or selecting specific colonies or areas as part of the re-plating process.

There are two standard protocols in use. The first method is the simplest and involves using  a non-enzymatic dissociation reagent. This operates similarly to Trypsin in standard cell culture and dislodges cells so that they can be transferred to a new culture vessel.

The second (and more time-consuming) method involves using dispase to gently break cell adhesion and then manually selecting the areas for collection. A needle is used to grid the selected colonies into equal(ish) segments. These are then gently dislodged with a spatula and transferred to a new culture vessel.

While the UTAS protocols are not for public dissemination, the Stem Cell Catalogue has a good overview of standard/recommended iPSC maintenance.